Package: epidict 0.3.0

Alexander Spina

epidict: Epidemiology Data Dictionaries and Random Data Generators

The 'R4EPIs' project <https://r4epi.github.io/sitrep/> seeks to provide a set of standardized tools for analysis of outbreak and survey data in humanitarian aid settings. This package currently provides standardized data dictionaries from Medecins Sans Frontieres Operational Centre Amsterdam for outbreak scenarios (Acute Jaundice Syndrome, Cholera, Diphtheria, Measles, Meningitis) and surveys (Retrospective mortality and access to care, Malnutrition, Vaccination coverage and Event Based Surveillance) - as described in the following <https://scienceportal.msf.org/assets/standardised-mortality-surveys?utm_source=chatgpt.com>. In addition, a data generator from these dictionaries is provided. It is also possible to read in any Open Data Kit format data dictionary.

Authors:Alexander Spina [aut, cre], Zhian N. Kamvar [aut], Lukas Richter [aut], Patrick Keating [aut], Annick Lenglet [ctb], Applied Epi Incorporated [cph], Medecins Sans Frontieres Operational Centre Amsterdam [fnd]

epidict_0.3.0.tar.gz
epidict_0.3.0.zip(r-4.7-any)epidict_0.3.0.zip(r-4.6-any)epidict_0.3.0.zip(r-4.5-any)
epidict_0.3.0.tgz(r-4.6-any)epidict_0.3.0.tgz(r-4.5-any)
epidict_0.3.0.tar.gz(r-4.7-any)epidict_0.3.0.tar.gz(r-4.6-any)
epidict_0.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
epidict/json (API)

# Install 'epidict' in R:
install.packages('epidict', repos = c('https://r4epi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/r4epi/epidict/issues

Pkgdown/docs site:https://r4epi.github.io

On CRAN:

Conda:

6.21 score 3 stars 1 packages 3 scripts 258 downloads 5 exports 28 dependencies

Last updated from:af2929949c. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK150
source / vignettesOK214
linux-releaseOK159
macos-releaseOK119
macos-oldrelOK77
windows-develOK100
windows-releaseOK83
windows-oldrelOK91
wasm-releaseOK148

Exports:dict_rename_helpergen_datamsf_dictmsf_dict_rename_helperread_dict

Dependencies:cellrangerclicliprcpp11crayondplyrgenericsgluehmslifecyclemagrittrpillarpkgconfigprettyunitsprogresspurrrR6readxlrematchrlangstringistringrtibbletidyrtidyselectutf8vctrswithr

MSF Outbreak Dictionaries
Acute Jaundice Syndrome (AJS) | Variables in the intersectional dictionary | Option codes in the intersectional dictionary | Variables in the OCA dictionary | Option codes in the OCA dictionary | Cholera | Measles | Meningitis | Diphtheria | Exploring the dictionaries

Last update: 2025-11-02
Started: 2020-02-11

MSF Survey Dictionaries
Retrospective mortality and access to care ("mortality") | Variables in the dictionary | Option codes | Malnutrition ("nutrition") | Vaccination Coverage ("vaccination_long" or "Vaccination_short") | Exploring the dictionaries

Last update: 2025-11-02
Started: 2020-02-11

Introduction to epidict

Last update: 2020-02-11
Started: 2020-02-11